Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trav16nA0A075B634 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Gm27032-201ENSMUST00000183124 1116 ntBASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav16nA0A075B634 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav16nA0A075B634 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Gm8969-201ENSMUST00000199694 526 ntBASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Gm5898-201ENSMUST00000121016 2071 ntBASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav16nA0A075B634 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.61□□□□□ -0.23
Trav16nA0A075B634 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Gm12251-201ENSMUST00000117893 792 ntBASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 AC121961.1-201ENSMUST00000218594 1779 ntBASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav16nA0A075B634 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms