Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7n-4A0A075B620 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Tgds-204ENSMUST00000228543 1594 ntBASIC13.66□□□□□ -0.22
Trav7n-4A0A075B620 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Gm7860-201ENSMUST00000121190 879 ntBASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7n-4A0A075B620 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7n-4A0A075B620 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Haglr-201ENSMUST00000100000 2085 ntBASIC13.63□□□□□ -0.23
Trav7n-4A0A075B620 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms