Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav13d-1A0A075B606 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Gm10812-201ENSMUST00000099864 546 ntBASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav13d-1A0A075B606 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav13d-1A0A075B606 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 BC021767-201ENSMUST00000126387 1716 ntBASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Gm44549-201ENSMUST00000208351 577 ntBASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav13d-1A0A075B606 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Gm10461-201ENSMUST00000202073 4786 ntBASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms