Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Nup88Q8CEC0 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm44735-201ENSMUST00000206197 1752 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm45838-201ENSMUST00000207355 2447 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm13193-201ENSMUST00000117275 225 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm17121-201ENSMUST00000170414 847 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm17222-201ENSMUST00000180135 847 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm26738-201ENSMUST00000181312 601 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Olfr467-201ENSMUST00000084756 927 ntBASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Nup88Q8CEC0 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Gm44045-201ENSMUST00000204906 2520 ntBASIC7.15□□□□□ -1.27
Nup88Q8CEC0 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm25564-201ENSMUST00000104604 132 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm13114-201ENSMUST00000117605 106 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm9428-201ENSMUST00000127214 769 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm24179-201ENSMUST00000158925 127 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm4332-201ENSMUST00000196114 346 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm43561-201ENSMUST00000199866 448 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm45259-201ENSMUST00000209217 1006 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Gm7570-201ENSMUST00000215246 698 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 AC120375.1-201ENSMUST00000227034 3612 ntBASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Nup88Q8CEC0 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 AC160029.1-201ENSMUST00000219628 2678 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm8692-201ENSMUST00000118102 438 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm14098-201ENSMUST00000119295 623 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm14805-201ENSMUST00000120172 340 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm23225-201ENSMUST00000158121 114 ntBASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Nup88Q8CEC0 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms