Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm5430-201ENSMUST00000182525 915 ntBASIC6.75□□□□□ -1.33
Trim9Q8C7M3 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.75□□□□□ -1.33
Trim9Q8C7M3 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.75□□□□□ -1.33
Trim9Q8C7M3 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm16074-201ENSMUST00000119524 444 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm13493-201ENSMUST00000120318 493 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm6081-201ENSMUST00000134472 489 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm26353-201ENSMUST00000158224 255 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm3489-201ENSMUST00000190083 528 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm44538-201ENSMUST00000205615 348 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 AC151904.3-201ENSMUST00000219266 895 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 AC151904.4-201ENSMUST00000219868 1319 ntBASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim9Q8C7M3 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm24272-201ENSMUST00000102329 98 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm12643-201ENSMUST00000116078 374 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm12653-201ENSMUST00000117778 561 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm15596-201ENSMUST00000121139 784 ntBASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim9Q8C7M3 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms