Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Trub1Q8C0D0 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm11617-201ENSMUST00000119609 639 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm11341-201ENSMUST00000122316 447 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm15265-202ENSMUST00000143287 814 ntTSL 3 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm25013-201ENSMUST00000158402 128 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm21399-201ENSMUST00000180210 597 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm29124-201ENSMUST00000186576 452 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm37463-201ENSMUST00000193819 796 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm44494-201ENSMUST00000196760 129 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm44316-201ENSMUST00000199274 97 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm7181-201ENSMUST00000202197 434 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm44251-201ENSMUST00000204963 442 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm45070-201ENSMUST00000208100 246 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.13□□□□□ -1.43
Trub1Q8C0D0 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm7571-201ENSMUST00000120252 927 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm6446-201ENSMUST00000120604 818 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm13578-201ENSMUST00000120849 590 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm15618-201ENSMUST00000121610 452 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm16164-201ENSMUST00000160078 468 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm3242-201ENSMUST00000171273 485 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm29663-201ENSMUST00000186962 853 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm37475-201ENSMUST00000193107 1015 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm6631-201ENSMUST00000193699 559 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm37341-201ENSMUST00000194680 371 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm43779-201ENSMUST00000196691 829 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm43743-202ENSMUST00000198353 491 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm44219-201ENSMUST00000203005 273 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.12□□□□□ -1.43
Trub1Q8C0D0 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.12□□□□□ -1.43
Trub1Q8C0D0 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms