Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm37356-201ENSMUST00000193362 1613 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm7269-201ENSMUST00000210819 1373 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Mir465c-2-201ENSMUST00000104757 81 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm11271-201ENSMUST00000116054 440 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm14887-201ENSMUST00000119522 663 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm23082-201ENSMUST00000157852 133 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm23896-201ENSMUST00000158109 130 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm38281-201ENSMUST00000192301 315 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm7142-201ENSMUST00000194232 586 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm44266-201ENSMUST00000205235 500 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm44773-201ENSMUST00000207374 557 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 AC101984.1-201ENSMUST00000219639 402 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm19195-201ENSMUST00000222018 511 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm16415-201ENSMUST00000080097 489 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm25578-201ENSMUST00000083406 104 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm43982-201ENSMUST00000204995 1829 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm37499-201ENSMUST00000194683 3478 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm37181-201ENSMUST00000192513 1727 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm37593-201ENSMUST00000191669 3254 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm19024-201ENSMUST00000194681 1319 ntBASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim41Q5NCC3 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim41Q5NCC3 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim41Q5NCC3 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC12.58□□□□□ -0.39
Trim41Q5NCC3 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Trim41Q5NCC3 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim41Q5NCC3 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm8424-201ENSMUST00000117716 988 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm14788-201ENSMUST00000119457 375 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm22342-201ENSMUST00000122647 298 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm2709-201ENSMUST00000142979 350 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm25556-201ENSMUST00000158077 144 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm17022-201ENSMUST00000166415 922 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Mir7211-201ENSMUST00000184071 63 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm29356-201ENSMUST00000186935 373 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm28625-201ENSMUST00000188309 205 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm30517-201ENSMUST00000197350 772 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm18409-202ENSMUST00000220105 529 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 AL591207.2-201ENSMUST00000222991 337 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 AC123665.3-201ENSMUST00000228735 1216 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim41Q5NCC3 AC105958.1-201ENSMUST00000214783 2144 ntBASIC12.58□□□□□ -0.4
Trim41Q5NCC3 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms