Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm17137-202ENSMUST00000165729 957 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm6631-201ENSMUST00000193699 559 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm35013-201ENSMUST00000197218 832 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm44382-201ENSMUST00000198683 122 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm43929-201ENSMUST00000203025 409 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm5886-202ENSMUST00000203957 522 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm19033-201ENSMUST00000208516 964 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 AC131029.2-201ENSMUST00000226696 628 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Mir3068-201ENSMUST00000083004 136 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm24454-201ENSMUST00000083349 132 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Upf3bQ3ULL6 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm22371-201ENSMUST00000104588 130 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm12618-201ENSMUST00000121754 483 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm6081-201ENSMUST00000134472 489 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Snora47-201ENSMUST00000157483 138 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm25013-201ENSMUST00000158402 128 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm27004-201ENSMUST00000183300 727 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Mir6992-201ENSMUST00000183342 109 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Mir6989-201ENSMUST00000184812 65 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm28934-201ENSMUST00000186491 346 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm37430-201ENSMUST00000193039 196 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm44251-201ENSMUST00000204963 442 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm17994-201ENSMUST00000209260 533 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 AV026068-216ENSMUST00000223874 328 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC6.43□□□□□ -1.38
Upf3bQ3ULL6 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Upf3bQ3ULL6 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms