Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Sox9Q04887 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm13400-201ENSMUST00000117436 380 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm12587-201ENSMUST00000120180 427 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm25906-201ENSMUST00000158489 126 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm29813-201ENSMUST00000195856 447 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm3544-201ENSMUST00000196129 305 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm5990-201ENSMUST00000203126 746 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm45850-201ENSMUST00000212536 338 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 AC099612.2-201ENSMUST00000226824 721 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox9Q04887 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm24454-201ENSMUST00000083349 132 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Mir134-201ENSMUST00000083492 71 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Sox9Q04887 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm34294-201ENSMUST00000191912 4263 ntBASIC6.87□□□□□ -1.31
Sox9Q04887 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Sox9Q04887 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Sox9Q04887 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox9Q04887 Pecam1-202ENSMUST00000080853 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm45263-201ENSMUST00000210377 1375 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox9Q04887 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 4930509K18Rik-201ENSMUST00000144039 1810 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm24789-201ENSMUST00000104282 131 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm22676-201ENSMUST00000116972 129 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm14576-201ENSMUST00000118073 1111 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm22339-201ENSMUST00000157718 62 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm25717-201ENSMUST00000158631 353 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm23343-201ENSMUST00000158964 143 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.86□□□□□ -1.31
Sox9Q04887 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox9Q04887 Mir7006-201ENSMUST00000183624 69 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm42437-201ENSMUST00000197263 923 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Sox9Q04887 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.86□□□□□ -1.31
Sox9Q04887 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 AC171206.1-201ENSMUST00000213612 213 ntBASIC6.86□□□□□ -1.31
Sox9Q04887 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Sox9Q04887 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms