Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm19212-201ENSMUST00000216642 862 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Glycam1-204ENSMUST00000228895 641 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm5582-201ENSMUST00000075251 522 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm23686-201ENSMUST00000083241 164 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm6419-201ENSMUST00000097166 429 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.7□□□□□ -1.5
Tnfsf4P43488 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Tnfsf4P43488 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm13998-201ENSMUST00000120952 335 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm11472-201ENSMUST00000121305 556 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm12369-201ENSMUST00000121343 942 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm12322-201ENSMUST00000121605 389 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm29124-201ENSMUST00000186576 452 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Ass-ps1-201ENSMUST00000197717 761 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm4870-201ENSMUST00000198525 1251 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm24200-201ENSMUST00000082955 157 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.69□□□□□ -1.5
Tnfsf4P43488 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Tnfsf4P43488 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm15765-201ENSMUST00000118407 910 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm9506-201ENSMUST00000118516 320 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm16418-201ENSMUST00000118577 171 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm6654-201ENSMUST00000118950 348 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm16074-201ENSMUST00000119524 444 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm14842-201ENSMUST00000119577 269 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm13991-201ENSMUST00000120190 648 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm7494-201ENSMUST00000121248 441 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.68□□□□□ -1.5
Tnfsf4P43488 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.68□□□□□ -1.5
Tnfsf4P43488 AC069561.1-201ENSMUST00000213750 424 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms