Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm13333-201ENSMUST00000119424 781 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Mir3110-201ENSMUST00000175053 80 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm6543-201ENSMUST00000197353 808 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm43561-201ENSMUST00000199866 448 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Atf1-ps-201ENSMUST00000120608 810 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm14601-201ENSMUST00000120892 236 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm8920-201ENSMUST00000196153 924 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm44111-201ENSMUST00000204649 399 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Gm18996-201ENSMUST00000214851 755 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm6744-201ENSMUST00000119303 543 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm11498-201ENSMUST00000120660 949 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm19256-201ENSMUST00000218550 231 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 AC165260.1-201ENSMUST00000224127 683 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Mir331-201ENSMUST00000083673 96 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm6786-201ENSMUST00000203165 1915 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Mir449c-201ENSMUST00000102192 109 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm12874-201ENSMUST00000117190 913 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm15096-201ENSMUST00000121918 878 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm12317-201ENSMUST00000122307 319 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Col6a6Q8C6K9 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms