Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm26514-201ENSMUST00000181087 4231 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Ttll4-201ENSMUST00000042125 10019 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm5430-201ENSMUST00000182525 915 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Mir6410-201ENSMUST00000184204 104 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm37908-201ENSMUST00000195828 470 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm7663-201ENSMUST00000201151 1240 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC9.46□□□□□ -0.9
Col17a1Q07563 AC115793.1-201ENSMUST00000216605 215 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col17a1Q07563 AC163646.1-201ENSMUST00000227704 397 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC9.46□□□□□ -0.9
Col17a1Q07563 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm22826-201ENSMUST00000083774 165 ntBASIC9.46□□□□□ -0.9
Col17a1Q07563 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col17a1Q07563 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm37525-201ENSMUST00000193499 2871 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm44620-201ENSMUST00000209183 2887 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Cers4-201ENSMUST00000008350 9475 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Olfr750-202ENSMUST00000216202 5789 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm37086-201ENSMUST00000193082 3452 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 AC158986.1-201ENSMUST00000228391 3455 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm13681-201ENSMUST00000117925 210 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm13222-201ENSMUST00000119638 138 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm13207-201ENSMUST00000119862 773 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm14037-201ENSMUST00000120576 313 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm15006-201ENSMUST00000121419 1122 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm26106-201ENSMUST00000157254 228 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm37880-201ENSMUST00000192216 3257 ntBASIC9.45□□□□□ -0.9
Col17a1Q07563 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col17a1Q07563 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col17a1Q07563 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm18422-202ENSMUST00000203798 2214 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm11908-201ENSMUST00000117755 347 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Mir7087-201ENSMUST00000184840 70 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm18752-201ENSMUST00000192876 608 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 CT010431.1-201ENSMUST00000221249 1080 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm2614-201ENSMUST00000223227 403 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col17a1Q07563 n-R5s161-201ENSMUST00000083728 114 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC9.44□□□□□ -0.9
Col17a1Q07563 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Col17a1Q07563 AC117769.3-201ENSMUST00000225814 1664 ntBASIC9.44□□□□□ -0.9
Col17a1Q07563 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Col17a1Q07563 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gm45221-201ENSMUST00000207822 2272 ntBASIC9.43□□□□□ -0.9
Col17a1Q07563 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Col17a1Q07563 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Col17a1Q07563 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms