Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm36501-201ENSMUST00000221857 745 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox9Q04887 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox9Q04887 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.89□□□□□ -1.31
Sox9Q04887 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm44562-201ENSMUST00000207194 1347 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox9Q04887 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm26289-201ENSMUST00000104169 131 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm13313-201ENSMUST00000118938 1084 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm14417-201ENSMUST00000120036 1074 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm13502-201ENSMUST00000121574 684 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm6182-201ENSMUST00000156439 1208 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm22599-201ENSMUST00000157597 132 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm25557-201ENSMUST00000158084 315 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm19560-201ENSMUST00000177510 514 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm27024-201ENSMUST00000182561 755 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm27864-201ENSMUST00000183704 190 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm8506-201ENSMUST00000186661 829 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm28413-201ENSMUST00000189369 291 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox9Q04887 Trbv28-201ENSMUST00000192804 264 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm35570-201ENSMUST00000198730 681 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm4602-201ENSMUST00000203198 308 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm19033-201ENSMUST00000208516 964 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm17911-201ENSMUST00000210806 877 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm18592-201ENSMUST00000221529 276 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 AC156574.2-201ENSMUST00000228023 282 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm6195-201ENSMUST00000063059 357 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Sox9Q04887 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
Sox9Q04887 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.88□□□□□ -1.31
Sox9Q04887 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
Sox9Q04887 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms