Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scn1bP97952 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm25415-201ENSMUST00000104220 132 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm11889-201ENSMUST00000118402 1079 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm11590-201ENSMUST00000118999 1455 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Scn1bP97952 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm13991-201ENSMUST00000120190 648 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm15171-201ENSMUST00000122191 334 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.61□□□□□ -1.51
Scn1bP97952 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm5345-201ENSMUST00000183076 1014 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm28060-201ENSMUST00000191554 189 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm37376-201ENSMUST00000192176 453 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm19002-201ENSMUST00000192649 1012 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm9517-201ENSMUST00000195021 874 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm9419-201ENSMUST00000200672 567 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm36378-201ENSMUST00000201709 388 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.61□□□□□ -1.51
Scn1bP97952 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm7557-201ENSMUST00000221935 865 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.61□□□□□ -1.51
Scn1bP97952 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 AC108947.1-201ENSMUST00000224274 1000 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 AC124569.3-201ENSMUST00000224860 1621 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 AC160962.1-203ENSMUST00000225167 1105 ntAPPRIS P5 BASIC5.61□□□□□ -1.51
Scn1bP97952 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scn1bP97952 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm5446-201ENSMUST00000091762 784 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.61□□□□□ -1.51
Scn1bP97952 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.61□□□□□ -1.51
Scn1bP97952 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scn1bP97952 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Mir688-201ENSMUST00000102055 75 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm10241-201ENSMUST00000117664 286 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.6□□□□□ -1.51
Scn1bP97952 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm25332-201ENSMUST00000158038 105 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm4202-201ENSMUST00000169025 733 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm26587-201ENSMUST00000180795 989 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm18875-201ENSMUST00000188563 882 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm37770-201ENSMUST00000192855 772 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms