Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col1a1P11087 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Col1a1P11087 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Col1a1P11087 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Col1a1P11087 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Col1a1P11087 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm9877-201ENSMUST00000064271 2627 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 AC167013.5-201ENSMUST00000227597 2947 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm14755-201ENSMUST00000118037 384 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm25603-201ENSMUST00000158361 105 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm36999-201ENSMUST00000192756 1046 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Gm9332-201ENSMUST00000198431 730 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm45249-201ENSMUST00000211021 348 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 CT010431.1-201ENSMUST00000221249 1080 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 CT485612.1-201ENSMUST00000222555 382 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 AC156016.5-201ENSMUST00000228742 355 ntBASIC7.09□□□□□ -1.27
Col1a1P11087 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Col1a1P11087 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Col1a1P11087 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC7.09□□□□□ -1.28
Col1a1P11087 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col1a1P11087 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Col1a1P11087 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.09□□□□□ -1.28
Col1a1P11087 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Col1a1P11087 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
Col1a1P11087 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm25826-201ENSMUST00000157090 137 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm5430-201ENSMUST00000182525 915 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm7825-201ENSMUST00000204046 416 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Col1a1P11087 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 CT025579.3-201ENSMUST00000224543 451 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm10064-201ENSMUST00000071235 399 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm42661-201ENSMUST00000202364 1442 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm42561-201ENSMUST00000202563 1442 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.08□□□□□ -1.28
Col1a1P11087 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Col1a1P11087 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Col1a1P11087 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Col1a1P11087 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Col1a1P11087 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.07□□□□□ -1.28
Col1a1P11087 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Col1a1P11087 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Mir678-201ENSMUST00000102114 84 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm24789-201ENSMUST00000104282 131 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm22710-201ENSMUST00000116892 125 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm12685-201ENSMUST00000121702 214 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Gm12488-201ENSMUST00000122449 499 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.07□□□□□ -1.28
Col1a1P11087 Gm5139-201ENSMUST00000175943 249 ntBASIC7.07□□□□□ -1.28
Col1a1P11087 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms