Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm8667-201ENSMUST00000211112 449 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm43336-201ENSMUST00000200487 4504 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm9315-201ENSMUST00000222696 908 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm10743-201ENSMUST00000219611 2358 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm7961-201ENSMUST00000201338 1436 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm15357-201ENSMUST00000119160 285 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm13214-201ENSMUST00000122137 408 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm5430-201ENSMUST00000182525 915 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm7496-201ENSMUST00000192573 1034 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 AC132112.1-201ENSMUST00000226354 505 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Zfyve16-201ENSMUST00000022217 6150 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Txlnb-201ENSMUST00000037964 4422 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm15950-201ENSMUST00000162902 1973 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm23608-201ENSMUST00000104545 128 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm6884-201ENSMUST00000119318 615 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm22011-201ENSMUST00000158790 123 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm8214-201ENSMUST00000172123 351 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Gm37310-201ENSMUST00000195237 2968 ntBASIC3.31□□□□□ -1.88
Herc1E9PZP8 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Herc1E9PZP8 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Gm20236-201ENSMUST00000193037 4540 ntBASIC3.3□□□□□ -1.88
Herc1E9PZP8 Gm37094-201ENSMUST00000193352 4540 ntBASIC3.3□□□□□ -1.88
Herc1E9PZP8 AC168056.3-201ENSMUST00000225395 2540 ntBASIC3.3□□□□□ -1.88
Herc1E9PZP8 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Herc1E9PZP8 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms