Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm14450-201ENSMUST00000119984 240 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm12599-201ENSMUST00000120534 792 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm13743-201ENSMUST00000121486 724 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm14366-201ENSMUST00000121970 730 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm11838-201ENSMUST00000121999 231 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm12518-201ENSMUST00000122075 779 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 n-R5s207-201ENSMUST00000122497 118 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Traj54-201ENSMUST00000165071 54 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm17060-201ENSMUST00000172394 824 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm20627-202ENSMUST00000176275 564 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm25082-201ENSMUST00000177296 255 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Mir6919-201ENSMUST00000185146 62 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm19280-201ENSMUST00000190191 205 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm37339-201ENSMUST00000194142 392 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm18702-201ENSMUST00000196923 588 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm19457-201ENSMUST00000200995 448 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm44281-201ENSMUST00000203090 166 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm18060-201ENSMUST00000207407 564 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 AC127279.1-201ENSMUST00000220140 637 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 AC118006.3-201ENSMUST00000223948 1176 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 AC107369.1-201ENSMUST00000227373 860 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm5185-201ENSMUST00000080271 619 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.92□□□□□ -1.3
Trim39Q9ESN2 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm22661-201ENSMUST00000104192 132 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Igkv13-87-201ENSMUST00000114214 286 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm11969-201ENSMUST00000118848 356 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm13865-201ENSMUST00000120957 865 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm5270-201ENSMUST00000121506 1002 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm12967-201ENSMUST00000122147 289 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm18342-201ENSMUST00000186987 694 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm2427-201ENSMUST00000189121 881 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm29143-201ENSMUST00000189462 201 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm29348-201ENSMUST00000189555 779 ntTSL 3 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm29739-201ENSMUST00000191760 529 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm38164-201ENSMUST00000192810 330 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.91□□□□□ -1.3
Trim39Q9ESN2 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.91□□□□□ -1.3
Trim39Q9ESN2 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms