Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm9245-201ENSMUST00000200528 983 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm43459-201ENSMUST00000202093 331 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm3800-201ENSMUST00000221086 554 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm24707-201ENSMUST00000082812 107 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Nkx6-1Q99MA9 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm23987-201ENSMUST00000117039 129 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm14865-201ENSMUST00000117523 494 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm13080-201ENSMUST00000120556 420 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm12890-201ENSMUST00000120885 373 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm14695-201ENSMUST00000121721 282 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm14413-201ENSMUST00000122158 408 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm13194-201ENSMUST00000142299 311 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm22793-201ENSMUST00000157227 330 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm6472-201ENSMUST00000178147 651 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm5260-201ENSMUST00000186157 949 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm29263-201ENSMUST00000188718 463 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm29598-201ENSMUST00000188996 588 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm37771-201ENSMUST00000193121 265 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm43198-201ENSMUST00000200927 326 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm38840-201ENSMUST00000204716 843 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm44565-201ENSMUST00000208194 269 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm44561-201ENSMUST00000208869 264 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Gm8667-201ENSMUST00000211112 449 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC157017.2-201ENSMUST00000218354 777 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 AC129208.2-201ENSMUST00000228506 320 ntBASIC6.63□□□□□ -1.35
Nkx6-1Q99MA9 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms