Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm6290-201ENSMUST00000207666 1158 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.47□□□□□ -1.53
Col6a6Q8C6K9 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm12308-201ENSMUST00000120440 389 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm22094-201ENSMUST00000158976 117 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm17086-201ENSMUST00000171346 484 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm26731-201ENSMUST00000180683 543 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm43235-201ENSMUST00000200121 297 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm42961-201ENSMUST00000202023 181 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm17165-201ENSMUST00000096155 493 ntBASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC5.46□□□□□ -1.53
Col6a6Q8C6K9 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm11622-201ENSMUST00000120525 691 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm22596-201ENSMUST00000157601 316 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm25489-201ENSMUST00000158727 141 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm18325-201ENSMUST00000203228 835 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 AC159208.1-201ENSMUST00000221403 649 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm18413-201ENSMUST00000221573 655 ntBASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
Col6a6Q8C6K9 Gm44797-201ENSMUST00000208780 1837 ntBASIC5.45□□□□□ -1.54
Col6a6Q8C6K9 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms