Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm22372-201ENSMUST00000104589 136 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm14529-201ENSMUST00000117894 406 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm13641-201ENSMUST00000117993 473 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm15090-201ENSMUST00000118787 1196 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm15089-201ENSMUST00000122332 1196 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm25178-201ENSMUST00000122633 325 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm15534-201ENSMUST00000137642 562 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.9□□□□□ -1.3
Sox9Q04887 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm23995-201ENSMUST00000158060 129 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm24179-201ENSMUST00000158925 127 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.9□□□□□ -1.3
Sox9Q04887 Mir6952-201ENSMUST00000185092 61 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm37934-201ENSMUST00000192902 402 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm37987-201ENSMUST00000194999 825 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm4742-201ENSMUST00000200261 771 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm44003-201ENSMUST00000203024 490 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm45608-201ENSMUST00000210948 389 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Sox9Q04887 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
Sox9Q04887 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.9□□□□□ -1.3
Sox9Q04887 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.9□□□□□ -1.31
Sox9Q04887 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.9□□□□□ -1.31
Sox9Q04887 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
Sox9Q04887 Gm5583-201ENSMUST00000174328 1519 ntBASIC6.9□□□□□ -1.31
Sox9Q04887 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.31
Sox9Q04887 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
Sox9Q04887 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC6.9□□□□□ -1.31
Sox9Q04887 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.9□□□□□ -1.31
Sox9Q04887 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm8765-201ENSMUST00000099518 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm906-201ENSMUST00000099521 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox9Q04887 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox9Q04887 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm8569-201ENSMUST00000117630 647 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm12748-201ENSMUST00000120763 504 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm11910-201ENSMUST00000121624 432 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm23587-201ENSMUST00000157658 84 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm25459-201ENSMUST00000157953 114 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm18415-201ENSMUST00000177464 647 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm27039-201ENSMUST00000182438 962 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm27817-201ENSMUST00000184302 233 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm37609-201ENSMUST00000191778 678 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm37328-201ENSMUST00000193191 640 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm38333-201ENSMUST00000193608 604 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Trbv9-201ENSMUST00000194494 290 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm19104-201ENSMUST00000198392 679 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm42652-201ENSMUST00000199073 614 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm44988-201ENSMUST00000203835 1161 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm43922-201ENSMUST00000205071 328 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm45269-201ENSMUST00000210359 282 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC6.89□□□□□ -1.31
Sox9Q04887 Gm7570-201ENSMUST00000215246 698 ntBASIC6.89□□□□□ -1.31
Sox9Q04887 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Sox9Q04887 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 160 ms