Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.61□□□□□ -1.35
NcanP55066 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NcanP55066 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.61□□□□□ -1.35
NcanP55066 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.61□□□□□ -1.35
NcanP55066 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
NcanP55066 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NcanP55066 Gm25415-201ENSMUST00000104220 132 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm15186-201ENSMUST00000119345 563 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm13488-201ENSMUST00000120419 179 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm22959-201ENSMUST00000122514 303 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.61□□□□□ -1.35
NcanP55066 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.61□□□□□ -1.35
NcanP55066 Gm23631-201ENSMUST00000175291 123 ntBASIC6.61□□□□□ -1.35
NcanP55066 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NcanP55066 Gm42452-201ENSMUST00000199749 617 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm8039-201ENSMUST00000204758 712 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm2225-201ENSMUST00000209570 377 ntBASIC6.61□□□□□ -1.35
NcanP55066 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.61□□□□□ -1.35
NcanP55066 CT025579.3-201ENSMUST00000224543 451 ntBASIC6.61□□□□□ -1.35
NcanP55066 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NcanP55066 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NcanP55066 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.61□□□□□ -1.35
NcanP55066 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.61□□□□□ -1.35
NcanP55066 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.61□□□□□ -1.35
NcanP55066 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NcanP55066 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.61□□□□□ -1.35
NcanP55066 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NcanP55066 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.61□□□□□ -1.35
NcanP55066 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NcanP55066 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.6□□□□□ -1.35
NcanP55066 Gm13870-201ENSMUST00000117214 1023 ntBASIC6.6□□□□□ -1.35
NcanP55066 Gm13818-201ENSMUST00000119441 511 ntBASIC6.6□□□□□ -1.35
NcanP55066 Gm15158-201ENSMUST00000120577 570 ntBASIC6.6□□□□□ -1.35
NcanP55066 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Gm9671-201ENSMUST00000171502 547 ntBASIC6.6□□□□□ -1.35
NcanP55066 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
NcanP55066 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC6.6□□□□□ -1.35
NcanP55066 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Gm44952-201ENSMUST00000204443 433 ntBASIC6.6□□□□□ -1.35
NcanP55066 Gm6562-201ENSMUST00000221903 464 ntBASIC6.6□□□□□ -1.35
NcanP55066 AC132260.2-201ENSMUST00000224482 344 ntBASIC6.6□□□□□ -1.35
NcanP55066 AC134860.6-201ENSMUST00000226038 285 ntBASIC6.6□□□□□ -1.35
NcanP55066 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.6□□□□□ -1.35
NcanP55066 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NcanP55066 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.6□□□□□ -1.35
NcanP55066 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.6□□□□□ -1.35
NcanP55066 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NcanP55066 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.59□□□□□ -1.35
NcanP55066 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.59□□□□□ -1.35
NcanP55066 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NcanP55066 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NcanP55066 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NcanP55066 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.59□□□□□ -1.35
NcanP55066 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NcanP55066 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NcanP55066 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms