Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.03□□□□□ -1.44
Fdft1P53798 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Fdft1P53798 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.03□□□□□ -1.44
Fdft1P53798 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.03□□□□□ -1.44
Fdft1P53798 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Fdft1P53798 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
Fdft1P53798 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.03□□□□□ -1.44
Fdft1P53798 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC6.03□□□□□ -1.44
Fdft1P53798 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Fdft1P53798 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Fdft1P53798 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.02□□□□□ -1.44
Fdft1P53798 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Fdft1P53798 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.02□□□□□ -1.44
Fdft1P53798 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.44
Fdft1P53798 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm9506-201ENSMUST00000118516 320 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm8722-201ENSMUST00000121466 769 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.02□□□□□ -1.45
Fdft1P53798 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm16269-201ENSMUST00000160532 409 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Mir7212-201ENSMUST00000184098 61 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm5260-201ENSMUST00000186157 949 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm7492-201ENSMUST00000201745 725 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm17994-201ENSMUST00000209260 533 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC6.02□□□□□ -1.45
Fdft1P53798 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Fdft1P53798 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Fdft1P53798 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Fdft1P53798 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Fdft1P53798 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm24032-201ENSMUST00000083932 159 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.02□□□□□ -1.45
Fdft1P53798 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Fdft1P53798 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Fdft1P53798 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Fdft1P53798 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Fdft1P53798 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Fdft1P53798 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
Fdft1P53798 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Fdft1P53798 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Fdft1P53798 Gm24069-201ENSMUST00000104512 127 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Gm14018-201ENSMUST00000119042 455 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Gm13438-201ENSMUST00000120100 573 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Gm7700-201ENSMUST00000120273 970 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Gm14515-201ENSMUST00000121327 216 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC6.01□□□□□ -1.45
Fdft1P53798 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Fdft1P53798 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Fdft1P53798 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Fdft1P53798 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 107.8 ms