Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm10410-201ENSMUST00000180138 384 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm26898-201ENSMUST00000181678 384 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm9517-201ENSMUST00000195021 874 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm4574-201ENSMUST00000207804 542 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 AC163032.1-201ENSMUST00000220671 2970 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.33□□□□□ -1.4
Tlr4Q9QUK6 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm14513-201ENSMUST00000117403 123 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm7058-201ENSMUST00000119209 902 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm23430-201ENSMUST00000122490 314 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm25219-201ENSMUST00000157545 330 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm23386-201ENSMUST00000158585 144 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 n-R5s209-201ENSMUST00000179494 119 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm20926-201ENSMUST00000194457 696 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm44623-201ENSMUST00000207934 434 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC104906.1-201ENSMUST00000218122 913 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC154219.1-201ENSMUST00000220764 1262 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC154424.1-201ENSMUST00000225883 799 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm26437-201ENSMUST00000082595 105 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Tlr4Q9QUK6 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Tlr4Q9QUK6 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Tlr4Q9QUK6 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Tlr4Q9QUK6 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Tlr4Q9QUK6 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Tlr4Q9QUK6 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms