Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Ptpre-204ENSMUST00000209979 4959 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Igkv11-106-201ENSMUST00000103331 346 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm25422-201ENSMUST00000104219 129 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm4852-201ENSMUST00000121202 729 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm2182-201ENSMUST00000145243 663 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm16107-201ENSMUST00000162523 862 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm26381-201ENSMUST00000174895 92 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC9.51□□□□□ -0.89
Col17a1Q07563 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 n-R5s56-201ENSMUST00000082521 105 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm29670-201ENSMUST00000190228 2491 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm26814-201ENSMUST00000181178 4149 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.51□□□□□ -0.89
Col17a1Q07563 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Col17a1Q07563 Gm43333-201ENSMUST00000198340 2262 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm43279-201ENSMUST00000202376 2512 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm21051-201ENSMUST00000221757 1688 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm15000-201ENSMUST00000118275 1243 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm13259-201ENSMUST00000120792 456 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm5834-201ENSMUST00000126680 1026 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm27972-201ENSMUST00000184720 137 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 AC158523.2-201ENSMUST00000222708 548 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Cfap44-202ENSMUST00000120049 6199 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Gm44045-201ENSMUST00000204906 2520 ntBASIC9.5□□□□□ -0.89
Col17a1Q07563 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Col17a1Q07563 Sptbn1-203ENSMUST00000102838 9107 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Col17a1Q07563 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Col17a1Q07563 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 AC156645.1-201ENSMUST00000223066 5194 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm12641-201ENSMUST00000117874 985 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm15428-201ENSMUST00000121352 333 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm17907-201ENSMUST00000173150 710 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm27855-201ENSMUST00000184122 128 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Olfr923-204ENSMUST00000219798 1068 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 AC122371.2-201ENSMUST00000220583 366 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 AC129085.4-201ENSMUST00000224536 570 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 AC154788.1-201ENSMUST00000225003 340 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Snord15b-201ENSMUST00000083032 145 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm42508-201ENSMUST00000199972 3292 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm18194-202ENSMUST00000210952 3442 ntBASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Ercc6-201ENSMUST00000066807 8423 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Col17a1Q07563 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Col17a1Q07563 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms