Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc28aQ8CEI3 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm8250-201ENSMUST00000117398 774 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm13183-201ENSMUST00000118615 789 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12099-201ENSMUST00000118660 750 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm12101-201ENSMUST00000121590 390 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm20453-201ENSMUST00000173968 226 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5947-201ENSMUST00000179156 714 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm5645-201ENSMUST00000179597 714 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm43850-201ENSMUST00000202021 578 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm6702-201ENSMUST00000208496 471 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 AC141425.1-201ENSMUST00000224989 265 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.28□□□□□ -1.4
Ccdc28aQ8CEI3 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.27□□□□□ -1.4
Ccdc28aQ8CEI3 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm22267-201ENSMUST00000104008 131 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm23294-201ENSMUST00000104150 164 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm7927-201ENSMUST00000118818 880 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm13444-201ENSMUST00000119445 522 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm18407-201ENSMUST00000192126 790 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm42640-201ENSMUST00000199792 1195 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm18290-201ENSMUST00000202900 844 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Ccdc28aQ8CEI3 Gm24041-201ENSMUST00000083115 156 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms