Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43611-201ENSMUST00000196656 4352 ntBASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Vps53Q8CCB4 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm12874-201ENSMUST00000117190 913 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm7058-201ENSMUST00000119209 902 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm11976-201ENSMUST00000119236 295 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm23071-201ENSMUST00000158242 115 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm3076-201ENSMUST00000161613 451 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm25246-201ENSMUST00000175476 69 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm37475-201ENSMUST00000193107 1015 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm20926-201ENSMUST00000194457 696 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm9517-201ENSMUST00000195021 874 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm42799-201ENSMUST00000201331 328 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm44265-201ENSMUST00000203631 465 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 CT030254.1-201ENSMUST00000225450 1078 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Gm14886-201ENSMUST00000117208 2629 ntBASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Vps53Q8CCB4 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm20644-201ENSMUST00000176721 2063 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm45786-201ENSMUST00000213021 2278 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Snora35-201ENSMUST00000104579 128 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm22710-201ENSMUST00000116892 125 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm12931-201ENSMUST00000117046 324 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm5387-201ENSMUST00000119776 857 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm13578-201ENSMUST00000120849 590 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm26169-201ENSMUST00000158420 135 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm9529-201ENSMUST00000177598 579 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm18700-201ENSMUST00000185791 553 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm3351-201ENSMUST00000193454 505 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm44387-201ENSMUST00000196298 145 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm5418-201ENSMUST00000206932 528 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm45448-201ENSMUST00000211739 209 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm24695-201ENSMUST00000083877 83 ntBASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Vps53Q8CCB4 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.34□□□□□ -1.24
Vps53Q8CCB4 Rab3b-202ENSMUST00000106650 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms