Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm42771-201ENSMUST00000198342 2486 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Zmynd11-205ENSMUST00000110636 4117 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Nsd2-203ENSMUST00000075812 7142 ntAPPRIS P4 TSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm22707-201ENSMUST00000103834 110 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm22438-201ENSMUST00000104049 132 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm22671-201ENSMUST00000104420 134 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm14000-201ENSMUST00000118670 233 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm13735-201ENSMUST00000120217 670 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm13024-201ENSMUST00000121756 718 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Mir3078-201ENSMUST00000175231 87 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm23139-201ENSMUST00000179454 132 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm28952-201ENSMUST00000189285 681 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm29138-201ENSMUST00000191444 348 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm37550-201ENSMUST00000193230 463 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm38109-201ENSMUST00000195386 181 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm17833-201ENSMUST00000197629 1065 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm7285-201ENSMUST00000198801 580 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm43345-201ENSMUST00000199484 269 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm44221-201ENSMUST00000203552 388 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm17984-201ENSMUST00000205286 859 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm18469-201ENSMUST00000208850 439 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 AC156504.1-201ENSMUST00000214608 157 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 CT030030.1-201ENSMUST00000218809 152 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 AC117202.3-201ENSMUST00000228532 310 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm23407-201ENSMUST00000082538 91 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 AC154747.4-203ENSMUST00000225893 1384 ntBASIC7.07□□□□□ -1.28
Pcdh19Q80TF3 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm42536-201ENSMUST00000197562 1613 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm24835-201ENSMUST00000116777 111 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm12044-201ENSMUST00000120335 213 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm12881-201ENSMUST00000121191 203 ntBASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC7.06□□□□□ -1.28
Pcdh19Q80TF3 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms