Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 CT009527.2-201ENSMUST00000225386 606 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Catsperg2-201ENSMUST00000061193 3957 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.78□□□□□ -1.48
Tnfsf4P43488 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Tnfsf4P43488 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Serpinb6e-201ENSMUST00000110275 1494 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm12308-201ENSMUST00000120440 389 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm11370-201ENSMUST00000120583 260 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm23762-201ENSMUST00000158348 106 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm4202-201ENSMUST00000169025 733 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm18700-201ENSMUST00000185791 553 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm37784-201ENSMUST00000193233 189 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 BC049739-201ENSMUST00000202626 660 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm6702-201ENSMUST00000208496 471 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm45448-201ENSMUST00000211739 209 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 AC125019.1-201ENSMUST00000224809 908 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm7808-201ENSMUST00000082002 387 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm24041-201ENSMUST00000083115 156 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.77□□□□□ -1.49
Tnfsf4P43488 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Tnfsf4P43488 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm23768-201ENSMUST00000104440 131 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm7927-201ENSMUST00000118818 880 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm15181-201ENSMUST00000120142 177 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm13593-201ENSMUST00000121329 692 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm12396-201ENSMUST00000121600 306 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Calr-ps-201ENSMUST00000121776 485 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm25281-201ENSMUST00000157270 104 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Mir1960-201ENSMUST00000157488 78 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm25904-201ENSMUST00000158491 143 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Tnfsf4P43488 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Tnfsf4P43488 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm18407-201ENSMUST00000192126 790 ntBASIC5.76□□□□□ -1.49
Tnfsf4P43488 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.76□□□□□ -1.49
Tnfsf4P43488 Gm8479-201ENSMUST00000203825 718 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms