Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm44178-201ENSMUST00000205229 2930 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 AC167013.5-201ENSMUST00000227597 2947 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC8.25□□□□□ -1.09
Col18a1P39061 Gm28429-201ENSMUST00000188521 363 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm37054-201ENSMUST00000193481 543 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm40692-201ENSMUST00000220411 491 ntBASIC8.25□□□□□ -1.09
Col18a1P39061 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Col18a1P39061 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm42436-201ENSMUST00000198804 3656 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm43113-201ENSMUST00000199713 1754 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm11516-201ENSMUST00000118450 1582 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm23948-201ENSMUST00000104030 132 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Gm13493-201ENSMUST00000120318 493 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm18748-201ENSMUST00000198507 622 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Gm42796-201ENSMUST00000199913 1087 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm45082-201ENSMUST00000206082 601 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Gm4548-201ENSMUST00000208487 509 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm28392-201ENSMUST00000077630 393 ntBASIC8.24□□□□□ -1.09
Col18a1P39061 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Col18a1P39061 Ncam1-204ENSMUST00000193547 6050 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Col18a1P39061 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Col18a1P39061 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm44102-201ENSMUST00000204031 1666 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm8750-201ENSMUST00000173278 1537 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm44661-201ENSMUST00000208830 3503 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Adar-202ENSMUST00000098924 5909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Mir708-201ENSMUST00000102189 109 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm24855-201ENSMUST00000104848 97 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm13077-201ENSMUST00000121941 484 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm13487-201ENSMUST00000122240 864 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm29036-201ENSMUST00000189967 877 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm44494-201ENSMUST00000196760 129 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm29755-201ENSMUST00000196976 948 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm44132-201ENSMUST00000205142 151 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Gm18863-201ENSMUST00000217004 1299 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 AC131100.2-201ENSMUST00000227701 998 ntBASIC8.23□□□□□ -1.09
Col18a1P39061 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col18a1P39061 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col18a1P39061 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Col18a1P39061 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Col18a1P39061 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Col18a1P39061 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC8.23□□□□□ -1.09
Col18a1P39061 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms