Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxd3P09027 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Kctd21-201ENSMUST00000054107 2966 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm15704-201ENSMUST00000144757 2818 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm7133-201ENSMUST00000187797 2039 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm37570-201ENSMUST00000195411 3106 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm24334-201ENSMUST00000104210 128 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm11408-201ENSMUST00000117889 519 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm12687-201ENSMUST00000119752 706 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm6587-201ENSMUST00000120219 613 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm14821-201ENSMUST00000121975 435 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm12517-201ENSMUST00000122082 425 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm13649-201ENSMUST00000122325 606 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Mir1962-201ENSMUST00000157516 121 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm22424-201ENSMUST00000158527 87 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm7191-201ENSMUST00000182678 990 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm18349-201ENSMUST00000187440 904 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm6472-202ENSMUST00000187973 582 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Trbv12-3-201ENSMUST00000192675 372 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm37501-201ENSMUST00000192830 691 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm43669-201ENSMUST00000198229 436 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm9419-201ENSMUST00000200672 567 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm43008-201ENSMUST00000202346 286 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm43976-201ENSMUST00000203637 235 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm44110-201ENSMUST00000203871 475 ntTSL 2 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm44687-201ENSMUST00000204975 235 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm44743-201ENSMUST00000209062 386 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm19140-201ENSMUST00000209790 421 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm33096-201ENSMUST00000210189 493 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm5649-201ENSMUST00000217918 951 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 AC154709.1-201ENSMUST00000222304 446 ntTSL 3 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm23851-201ENSMUST00000083831 103 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm43080-201ENSMUST00000199006 2643 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Parva-203ENSMUST00000106643 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hoxd3P09027 Gm12183-201ENSMUST00000120566 1848 ntBASIC6.18□□□□□ -1.42
Hoxd3P09027 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hoxd3P09027 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Hoxd3P09027 Gm37780-201ENSMUST00000194117 1873 ntBASIC6.17□□□□□ -1.42
Hoxd3P09027 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms