Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm26489-201ENSMUST00000157880 264 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm23224-201ENSMUST00000158122 271 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm22132-201ENSMUST00000175316 100 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm3307-201ENSMUST00000176164 632 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm25942-201ENSMUST00000180080 110 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm42522-201ENSMUST00000196071 255 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm4032-201ENSMUST00000210886 487 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm19189-201ENSMUST00000221689 754 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Gm24029-201ENSMUST00000083928 143 ntBASIC6.3□□□□□ -1.4
Col4a6B1AVK5 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Thap6-201ENSMUST00000191860 3151 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm24855-201ENSMUST00000104848 97 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Mup-ps19-201ENSMUST00000120390 519 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm22235-201ENSMUST00000157085 110 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm38015-201ENSMUST00000193048 188 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm38670-201ENSMUST00000199248 77 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm25682-201ENSMUST00000083942 164 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Gm43857-201ENSMUST00000200343 3079 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Col4a6B1AVK5 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm12287-201ENSMUST00000119770 707 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm5809-201ENSMUST00000121854 529 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm12293-201ENSMUST00000121898 590 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm15187-201ENSMUST00000122329 264 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm26106-201ENSMUST00000157254 228 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm28640-201ENSMUST00000190918 550 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm8920-201ENSMUST00000196153 924 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm32158-201ENSMUST00000200135 404 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm4587-201ENSMUST00000209135 637 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col4a6B1AVK5 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms