Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Olfr140-203ENSMUST00000216475 3574 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Gm42820-201ENSMUST00000200084 3063 ntBASIC8.64□□□□□ -1.03
Ube3bQ9ES34 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.64□□□□□ -1.03
Ube3bQ9ES34 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm44289-201ENSMUST00000204144 1390 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Kif14-203ENSMUST00000189413 8943 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm14899-201ENSMUST00000118673 548 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm12740-201ENSMUST00000118794 308 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm11512-201ENSMUST00000119669 663 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Amd-ps1-201ENSMUST00000120127 994 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm24057-201ENSMUST00000158616 302 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr331-202ENSMUST00000170501 957 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm7426-201ENSMUST00000179046 404 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm7634-201ENSMUST00000185778 553 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm37526-201ENSMUST00000194640 619 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm22711-202ENSMUST00000197029 135 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Mir6375-201ENSMUST00000197176 95 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm24826-202ENSMUST00000197298 216 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm5154-201ENSMUST00000203971 399 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm9652-201ENSMUST00000209345 163 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm36758-201ENSMUST00000222594 310 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm16020-201ENSMUST00000084281 210 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm36041-201ENSMUST00000218971 2245 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm10619-201ENSMUST00000098372 2695 ntTSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Ube3bQ9ES34 Gm6866-201ENSMUST00000188559 2549 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 A730049H05Rik-201ENSMUST00000057977 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm26417-201ENSMUST00000104274 135 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm15021-201ENSMUST00000117832 742 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm11903-201ENSMUST00000118958 727 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm14991-201ENSMUST00000119913 598 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm13735-201ENSMUST00000120217 670 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm13221-201ENSMUST00000121712 430 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm12920-201ENSMUST00000121818 1186 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm8715-201ENSMUST00000162728 531 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm7346-201ENSMUST00000169661 476 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm26607-201ENSMUST00000180661 867 ntBASIC8.62□□□□□ -1.03
Ube3bQ9ES34 Gm8392-201ENSMUST00000185647 835 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms