Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 AC105407.2-205ENSMUST00000224680 2733 ntBASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.68□□□□□ -1.34
Nkx6-1Q99MA9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm38302-201ENSMUST00000191676 2076 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm2654-201ENSMUST00000221381 1592 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm11357-201ENSMUST00000119758 954 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm5255-201ENSMUST00000120125 642 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm14898-201ENSMUST00000120202 645 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm14054-201ENSMUST00000120744 704 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm16057-201ENSMUST00000120811 759 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm12881-201ENSMUST00000121191 203 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm6977-201ENSMUST00000121568 512 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm8669-201ENSMUST00000183839 945 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm43493-201ENSMUST00000199837 202 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm34424-201ENSMUST00000213400 782 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm2089-201ENSMUST00000218294 479 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 AC116465.1-201ENSMUST00000220324 235 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm30738-201ENSMUST00000221346 502 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Mir296-201ENSMUST00000083587 79 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm42874-201ENSMUST00000198888 1774 ntBASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Nkx6-1Q99MA9 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm38300-201ENSMUST00000194245 1870 ntBASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC6.66□□□□□ -1.34
Nkx6-1Q99MA9 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms