Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
Rab11fip3Q8CHD8 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
Rab11fip3Q8CHD8 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC8.34□□□□□ -1.08
Rab11fip3Q8CHD8 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 AC130217.2-201ENSMUST00000224009 2990 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm22953-201ENSMUST00000116724 101 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm13604-201ENSMUST00000119332 482 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm22923-201ENSMUST00000174952 110 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm27653-201ENSMUST00000185037 136 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm43295-201ENSMUST00000201439 412 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm44162-201ENSMUST00000203543 544 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 CT030124.1-201ENSMUST00000217130 235 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 AC154718.1-201ENSMUST00000226676 250 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Gm45457-201ENSMUST00000209931 3089 ntBASIC8.33□□□□□ -1.08
Rab11fip3Q8CHD8 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm37311-201ENSMUST00000195541 2024 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm13578-201ENSMUST00000120849 590 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm28527-201ENSMUST00000185210 297 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm29234-201ENSMUST00000187452 1262 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm8869-201ENSMUST00000195222 947 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm2996-201ENSMUST00000211398 537 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 AV026068-216ENSMUST00000223874 328 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 AV026068-218ENSMUST00000223980 575 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 AC116319.2-201ENSMUST00000228159 984 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm24405-201ENSMUST00000083033 167 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm45322-201ENSMUST00000211642 1361 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rab11fip3Q8CHD8 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rab11fip3Q8CHD8 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC8.31□□□□□ -1.08
Rab11fip3Q8CHD8 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rab11fip3Q8CHD8 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms