Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm23774-201ENSMUST00000158990 131 ntBASIC9.55□□□□□ -0.88
Col17a1Q07563 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm24081-201ENSMUST00000175177 125 ntBASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm19080-201ENSMUST00000196082 550 ntBASIC9.55□□□□□ -0.88
Col17a1Q07563 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm45228-201ENSMUST00000206585 352 ntBASIC9.55□□□□□ -0.88
Col17a1Q07563 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Col17a1Q07563 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 C78859-201ENSMUST00000212800 5943 ntBASIC9.55□□□□□ -0.88
Col17a1Q07563 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Col17a1Q07563 Tcf20-202ENSMUST00000109510 7347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm12754-201ENSMUST00000121908 454 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm23171-201ENSMUST00000157159 264 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm45574-201ENSMUST00000210921 331 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC9.54□□□□□ -0.88
Col17a1Q07563 AC158955.1-201ENSMUST00000227140 385 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm42866-201ENSMUST00000195919 3304 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Col17a1Q07563 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC9.54□□□□□ -0.88
Col17a1Q07563 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Col17a1Q07563 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm13567-201ENSMUST00000118026 247 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm11622-201ENSMUST00000120525 691 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm20954-201ENSMUST00000189078 644 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Igkv2-107-201ENSMUST00000196000 313 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm8667-201ENSMUST00000211112 449 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm9655-201ENSMUST00000211321 1284 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 AC132881.2-201ENSMUST00000225474 709 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Col17a1Q07563 AC136019.1-201ENSMUST00000226503 1412 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Olfr943-202ENSMUST00000213176 8275 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Magea9-ps-201ENSMUST00000140655 732 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm3339-201ENSMUST00000163462 475 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm6611-201ENSMUST00000163830 1272 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Magea9-ps-202ENSMUST00000167328 899 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.53□□□□□ -0.88
Col17a1Q07563 AC126554.2-201ENSMUST00000223259 400 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 CU062626.1-201ENSMUST00000225248 505 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Col17a1Q07563 Gm24200-201ENSMUST00000082955 157 ntBASIC9.53□□□□□ -0.88
Col17a1Q07563 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Col17a1Q07563 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Col17a1Q07563 Cenpi-201ENSMUST00000081064 3227 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Col17a1Q07563 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Col17a1Q07563 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Col17a1Q07563 Vps13b-201ENSMUST00000048646 13757 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
Col17a1Q07563 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
Col17a1Q07563 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Col17a1Q07563 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC9.52□□□□□ -0.89
Col17a1Q07563 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms