Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm18529-201ENSMUST00000193025 1257 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm6631-201ENSMUST00000193699 559 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm37002-201ENSMUST00000194560 373 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm7443-201ENSMUST00000206355 378 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC8.08□□□□□ -1.12
Smarcc1P97496 AC122034.1-201ENSMUST00000227641 595 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 AC080021.1-201ENSMUST00000228104 700 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Smarcc1P97496 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.08□□□□□ -1.12
Smarcc1P97496 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm11242-201ENSMUST00000120103 2457 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm38178-201ENSMUST00000194502 2471 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Smarcc1P97496 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.08□□□□□ -1.12
Smarcc1P97496 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Smarcc1P97496 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Smarcc1P97496 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC8.07□□□□□ -1.12
Smarcc1P97496 AC151904.4-201ENSMUST00000219868 1319 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm12193-201ENSMUST00000117250 379 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm11984-201ENSMUST00000118142 766 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm5754-201ENSMUST00000118774 892 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm3025-201ENSMUST00000163454 489 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm3077-201ENSMUST00000165903 627 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm2878-201ENSMUST00000170173 486 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm18348-201ENSMUST00000191227 820 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm37599-201ENSMUST00000193067 489 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm43765-201ENSMUST00000196303 893 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm43774-201ENSMUST00000196327 878 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm43105-201ENSMUST00000202987 459 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC8.07□□□□□ -1.12
Smarcc1P97496 AC139568.1-201ENSMUST00000222878 486 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 AL589696.1-201ENSMUST00000225711 330 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 AC122393.2-201ENSMUST00000226404 1093 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 AC123658.1-201ENSMUST00000228364 867 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.07□□□□□ -1.12
Smarcc1P97496 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Smarcc1P97496 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Smarcc1P97496 Gm15011-201ENSMUST00000117724 1480 ntBASIC8.06□□□□□ -1.12
Smarcc1P97496 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.06□□□□□ -1.12
Smarcc1P97496 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC8.06□□□□□ -1.12
Smarcc1P97496 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm20486-201ENSMUST00000101544 128 ntBASIC8.06□□□□□ -1.12
Smarcc1P97496 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Smarcc1P97496 Gm15073-201ENSMUST00000117432 634 ntBASIC8.06□□□□□ -1.12
Smarcc1P97496 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms