Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm4574-201ENSMUST00000207804 542 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm2767-201ENSMUST00000209582 473 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm8556-201ENSMUST00000210437 664 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm45343-201ENSMUST00000210452 828 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm18860-201ENSMUST00000212029 764 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm7769-201ENSMUST00000212900 933 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm17199-201ENSMUST00000097296 416 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm38026-201ENSMUST00000193284 3880 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Pcdh1F7BJK1 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC158981.2-201ENSMUST00000227565 1537 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC153881.3-201ENSMUST00000218494 1561 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm15176-201ENSMUST00000117734 135 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm14985-201ENSMUST00000118693 786 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm2199-201ENSMUST00000119065 874 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm9064-201ENSMUST00000163579 566 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Scgb1b28-ps-201ENSMUST00000163647 290 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm17194-201ENSMUST00000164610 348 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm17217-201ENSMUST00000166613 469 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm26194-201ENSMUST00000175036 71 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm22569-201ENSMUST00000175545 124 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm23145-201ENSMUST00000178912 79 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm43926-201ENSMUST00000203978 430 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm45734-201ENSMUST00000211916 411 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC153153.2-201ENSMUST00000223572 411 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC156790.3-201ENSMUST00000226200 254 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 AC154838.1-201ENSMUST00000228944 911 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr683-201ENSMUST00000061284 960 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm5528-201ENSMUST00000076314 480 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm6887-201ENSMUST00000080945 482 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm25586-201ENSMUST00000082499 112 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Gm22504-201ENSMUST00000082963 139 ntBASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Pcdh1F7BJK1 Mir465-201ENSMUST00000093563 74 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms