Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm14237-201ENSMUST00000122080 430 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm25363-201ENSMUST00000158850 245 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Mir8097-201ENSMUST00000185150 119 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm8613-201ENSMUST00000220383 1077 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm11852-201ENSMUST00000120806 222 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Mirt2-201ENSMUST00000175179 285 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm21399-201ENSMUST00000180210 597 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm44219-201ENSMUST00000203005 273 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Gm8412-201ENSMUST00000077493 440 ntBASIC6.35□□□□□ -1.39
Scn1aA2APX8 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Scn1aA2APX8 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.34□□□□□ -1.39
Scn1aA2APX8 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Olfr115-203ENSMUST00000223366 2273 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm15186-201ENSMUST00000119345 563 ntBASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm14842-201ENSMUST00000119577 269 ntBASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm23225-201ENSMUST00000158121 114 ntBASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm3650-201ENSMUST00000180600 747 ntBASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Scn1aA2APX8 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Scn1aA2APX8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC6.34□□□□□ -1.4
Scn1aA2APX8 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Scn1aA2APX8 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.34□□□□□ -1.4
Scn1aA2APX8 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.34□□□□□ -1.4
Scn1aA2APX8 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Scn1aA2APX8 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 AC154806.2-201ENSMUST00000227212 2385 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm13866-201ENSMUST00000118901 968 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm4234-201ENSMUST00000119747 714 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm15237-201ENSMUST00000122104 469 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm22518-201ENSMUST00000158267 68 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm18952-201ENSMUST00000194471 846 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm37341-201ENSMUST00000194680 371 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm44053-201ENSMUST00000203364 929 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm44243-201ENSMUST00000204323 692 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm45596-201ENSMUST00000209279 434 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Gm6068-201ENSMUST00000222270 387 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.33□□□□□ -1.4
Scn1aA2APX8 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Scn1aA2APX8 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms