Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm29175-201ENSMUST00000189500 402 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm28264-201ENSMUST00000190657 398 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm37247-201ENSMUST00000192549 730 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm42431-201ENSMUST00000196880 323 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm4921-201ENSMUST00000219804 992 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm18629-201ENSMUST00000222496 884 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 AC124524.2-201ENSMUST00000223940 588 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 AC129935.1-201ENSMUST00000226302 873 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gpihbp1-201ENSMUST00000023243 825 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Asb12-201ENSMUST00000033549 1258 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr432-201ENSMUST00000062665 939 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm23628-201ENSMUST00000082464 173 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 n-R5s86-201ENSMUST00000083215 119 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm24765-201ENSMUST00000083691 103 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm10805-201ENSMUST00000099710 399 ntBASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trim39Q9ESN2 Gm43665-201ENSMUST00000198672 1659 ntBASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Trim39Q9ESN2 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm7785-201ENSMUST00000117121 892 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm14885-201ENSMUST00000117969 496 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm14824-201ENSMUST00000119421 737 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm11512-201ENSMUST00000119669 663 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Amd-ps1-201ENSMUST00000120127 994 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm11965-201ENSMUST00000122017 277 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm15885-201ENSMUST00000122114 388 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm24444-201ENSMUST00000157244 308 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm26408-201ENSMUST00000157672 127 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm11107-201ENSMUST00000165414 505 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm7031-201ENSMUST00000173709 919 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm20543-201ENSMUST00000174200 726 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm25598-201ENSMUST00000179031 107 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Gm26269-201ENSMUST00000180144 126 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Mir6239-201ENSMUST00000183564 105 ntBASIC6.96□□□□□ -1.3
Trim39Q9ESN2 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 115.3 ms