Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm28614-201ENSMUST00000186483 458 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm18428-201ENSMUST00000194986 791 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm37908-201ENSMUST00000195828 470 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm4874-201ENSMUST00000203589 691 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm4247-201ENSMUST00000211441 1042 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm10126-201ENSMUST00000221732 168 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 CT030260.1-201ENSMUST00000223243 442 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 AC134869.2-201ENSMUST00000225788 421 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm2531-201ENSMUST00000075609 512 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm37254-201ENSMUST00000193542 3901 ntBASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Trim11Q99PQ2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm25757-201ENSMUST00000103986 123 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm23485-201ENSMUST00000104181 155 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm13566-201ENSMUST00000117428 1142 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm13798-201ENSMUST00000118285 139 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm13690-201ENSMUST00000118989 285 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm15785-201ENSMUST00000119145 694 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm13207-201ENSMUST00000119862 773 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm14457-201ENSMUST00000148069 1161 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm23639-201ENSMUST00000175078 132 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm21742-201ENSMUST00000189352 548 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm38373-201ENSMUST00000192042 288 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm43147-201ENSMUST00000196944 542 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm19617-201ENSMUST00000202977 308 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 CT573422.1-201ENSMUST00000216655 405 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Gm7731-201ENSMUST00000091759 470 ntBASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim11Q99PQ2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms