Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm24359-201ENSMUST00000158418 221 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Gm8185-201ENSMUST00000160999 669 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Mir6903-201ENSMUST00000183597 88 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Gm28066-201ENSMUST00000188657 472 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 AL603745.1-201ENSMUST00000215473 532 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp54Q8BL06 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.66□□□□□ -1.02
Usp54Q8BL06 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Usp54Q8BL06 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Usp54Q8BL06 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm8501-201ENSMUST00000117684 432 ntBASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.65□□□□□ -1.02
Usp54Q8BL06 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm18850-201ENSMUST00000211578 388 ntBASIC8.65□□□□□ -1.02
Usp54Q8BL06 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.65□□□□□ -1.02
Usp54Q8BL06 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 AC110043.1-201ENSMUST00000220278 1627 ntBASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Usp54Q8BL06 Gm43031-201ENSMUST00000198500 1887 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Mir1188-201ENSMUST00000116756 120 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Ear-ps5-201ENSMUST00000164700 463 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm27985-201ENSMUST00000185112 378 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm18407-201ENSMUST00000192126 790 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm7832-201ENSMUST00000202613 880 ntBASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Usp54Q8BL06 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm42692-201ENSMUST00000199482 2833 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm15425-201ENSMUST00000119013 2711 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm38015-201ENSMUST00000193048 188 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm37341-201ENSMUST00000194680 371 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm43516-201ENSMUST00000196891 322 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm43743-202ENSMUST00000198353 491 ntBASIC8.64□□□□□ -1.03
Usp54Q8BL06 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms