Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm11488-201ENSMUST00000117277 863 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm12889-201ENSMUST00000118684 241 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm5601-201ENSMUST00000118909 972 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm24687-201ENSMUST00000157758 241 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm24225-201ENSMUST00000158825 98 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12l1-201ENSMUST00000183090 399 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm28416-201ENSMUST00000188334 292 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm42958-201ENSMUST00000197595 318 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm45497-201ENSMUST00000211701 740 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 AC124778.1-201ENSMUST00000216013 162 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Gm44117-201ENSMUST00000204442 1758 ntBASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim41Q5NCC3 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm7134-201ENSMUST00000122296 2406 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm2654-201ENSMUST00000221381 1592 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm5454-201ENSMUST00000052030 1453 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Klf5-202ENSMUST00000226784 2852 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 AC158605.4-201ENSMUST00000219013 3361 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm18259-201ENSMUST00000220991 2010 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm22707-201ENSMUST00000103834 110 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Mir190b-201ENSMUST00000104803 80 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm11462-201ENSMUST00000117749 562 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm7973-201ENSMUST00000122107 488 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm5272-201ENSMUST00000182730 982 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Mir6403-201ENSMUST00000185007 129 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm45400-201ENSMUST00000211603 653 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm18774-201ENSMUST00000218269 601 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm9118-201ENSMUST00000219246 754 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 AC151730.1-201ENSMUST00000226106 448 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Gm37663-201ENSMUST00000191887 2299 ntBASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Tbcel-203ENSMUST00000125995 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim41Q5NCC3 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Wnk1-218ENSMUST00000161512 1426 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 AC166574.5-201ENSMUST00000227438 1432 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Rian-209ENSMUST00000182406 3476 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm13803-201ENSMUST00000117547 489 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm12370-201ENSMUST00000117809 604 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm15763-201ENSMUST00000120136 403 ntBASIC12.72□□□□□ -0.37
Trim41Q5NCC3 Gm3339-201ENSMUST00000163462 475 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms