Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm23553-201ENSMUST00000157817 295 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm22367-201ENSMUST00000178930 132 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Mir6899-201ENSMUST00000184798 64 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm44494-201ENSMUST00000196760 129 ntBASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Cdh23Q99PF4 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm43788-201ENSMUST00000201539 2417 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm9085-201ENSMUST00000119994 1072 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Mir1946b-201ENSMUST00000157853 133 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm22993-201ENSMUST00000175423 254 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm37103-201ENSMUST00000191830 115 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Nbr1-202ENSMUST00000103098 4654 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdh23Q99PF4 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 n-R5s82-201ENSMUST00000104213 109 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm19002-201ENSMUST00000192649 1012 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm35648-201ENSMUST00000202304 475 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm4263-201ENSMUST00000220693 1101 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC6□□□□□ -1.45
Cdh23Q99PF4 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm12641-201ENSMUST00000117874 985 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm12293-201ENSMUST00000121898 590 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm6061-201ENSMUST00000175860 492 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6□□□□□ -1.45
Cdh23Q99PF4 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 Gm37272-201ENSMUST00000193401 488 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Cdh23Q99PF4 AC133517.2-201ENSMUST00000226820 690 ntBASIC6□□□□□ -1.45
Cdh23Q99PF4 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm38187-201ENSMUST00000195609 4709 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm11908-201ENSMUST00000117755 347 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm13737-201ENSMUST00000119793 232 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm7780-201ENSMUST00000214787 406 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm43870-201ENSMUST00000205102 4369 ntBASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh23Q99PF4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
Cdh23Q99PF4 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdh23Q99PF4 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms