Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13484-201ENSMUST00000120738 412 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm14600-201ENSMUST00000121032 630 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 BC064078-201ENSMUST00000122939 570 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm24498-201ENSMUST00000158445 102 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm37295-201ENSMUST00000192186 109 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm43659-201ENSMUST00000200894 628 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm34005-201ENSMUST00000215834 282 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 AC112274.2-201ENSMUST00000218436 170 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 AC107453.2-201ENSMUST00000227714 655 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm9788-201ENSMUST00000057038 906 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Mir296-201ENSMUST00000083587 79 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Gm42576-201ENSMUST00000202336 2846 ntBASIC7.6□□□□□ -1.19
Clp1Q99LI9 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
Clp1Q99LI9 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Clp1Q99LI9 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm14865-201ENSMUST00000117523 494 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm15186-201ENSMUST00000119345 563 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm12873-201ENSMUST00000119988 422 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm23430-201ENSMUST00000122490 314 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm14747-201ENSMUST00000149888 984 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm23756-201ENSMUST00000157582 114 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm16589-201ENSMUST00000159522 918 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm16027-201ENSMUST00000161618 758 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm8183-201ENSMUST00000183134 980 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm27804-201ENSMUST00000185135 119 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm29281-201ENSMUST00000188077 381 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm28190-201ENSMUST00000189766 722 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm6074-201ENSMUST00000193340 451 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm18952-201ENSMUST00000194471 846 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm43884-201ENSMUST00000204251 559 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm7413-201ENSMUST00000219498 462 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Clp1Q99LI9 Gm36758-201ENSMUST00000222594 310 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 AC124524.2-201ENSMUST00000223940 588 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC7.59□□□□□ -1.19
Clp1Q99LI9 AC154335.1-201ENSMUST00000224744 395 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms