Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23829-201ENSMUST00000157392 270 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm25223-201ENSMUST00000158200 110 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm22667-201ENSMUST00000158718 328 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm16326-201ENSMUST00000162843 414 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm44574-201ENSMUST00000172729 390 ntTSL 2 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Mir3093-201ENSMUST00000175247 87 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm27521-201ENSMUST00000184022 64 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm8388-201ENSMUST00000193000 756 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm37758-201ENSMUST00000194275 629 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm43157-201ENSMUST00000198223 412 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm43393-201ENSMUST00000200147 194 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm44634-201ENSMUST00000206119 152 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm45156-201ENSMUST00000207255 439 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm7997-201ENSMUST00000210546 980 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm7839-201ENSMUST00000210755 673 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm18942-201ENSMUST00000213578 1121 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 CT030657.4-201ENSMUST00000222177 744 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm7822-201ENSMUST00000222433 581 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 4930553J12Rik-201ENSMUST00000023648 381 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gsta1-201ENSMUST00000098537 875 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm10813-201ENSMUST00000099936 90 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Aoc1-204ENSMUST00000167529 2734 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm43800-201ENSMUST00000201868 2731 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gpr183-201ENSMUST00000049872 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Mkrn2-201ENSMUST00000000449 6230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm11885-201ENSMUST00000118473 1428 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC9.12□□□□□ -0.95
Trim35Q8C006 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm38352-201ENSMUST00000194459 2557 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trim35Q8C006 Gm14895-201ENSMUST00000121858 1361 ntBASIC9.12□□□□□ -0.95
Trim35Q8C006 Cwc25-201ENSMUST00000018685 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Ddx1-201ENSMUST00000071103 4842 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Sec14l3-201ENSMUST00000068322 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm38379-201ENSMUST00000194351 1525 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm1123-201ENSMUST00000076730 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Elovl4-201ENSMUST00000034796 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 4430402I18Rik-208ENSMUST00000179171 2638 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Eef1g-201ENSMUST00000052248 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 AC171003.1-201ENSMUST00000221667 1665 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Stag1-201ENSMUST00000041418 5909 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Trim34a-203ENSMUST00000106849 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Acsl6-206ENSMUST00000101211 3106 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm42987-201ENSMUST00000197115 2350 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm12481-201ENSMUST00000102482 297 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm14355-201ENSMUST00000117352 264 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm12980-201ENSMUST00000118912 336 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm12482-201ENSMUST00000120435 630 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm12983-201ENSMUST00000120974 310 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm14333-201ENSMUST00000130484 264 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm22433-201ENSMUST00000158550 142 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm24875-201ENSMUST00000158888 104 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm17148-201ENSMUST00000164702 249 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm5459-201ENSMUST00000171235 798 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm17169-201ENSMUST00000171382 351 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm26430-201ENSMUST00000178054 107 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm5710-201ENSMUST00000183020 995 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm29201-201ENSMUST00000189120 431 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm6057-201ENSMUST00000195927 314 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm43710-201ENSMUST00000199583 452 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm44125-201ENSMUST00000203068 448 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm9354-201ENSMUST00000209075 468 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm18194-201ENSMUST00000210455 481 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm45514-201ENSMUST00000211531 689 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 CT572985.2-201ENSMUST00000220496 211 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 Gm20288-201ENSMUST00000222078 180 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 AC174797.2-203ENSMUST00000224017 716 ntBASIC9.11□□□□□ -0.95
Trim35Q8C006 AC121997.1-201ENSMUST00000226423 793 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms