Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
AtmQ62388 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
AtmQ62388 Gm232-201ENSMUST00000216549 2559 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Gm26310-201ENSMUST00000157766 117 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Gm8524-201ENSMUST00000186232 379 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Gm7557-201ENSMUST00000221935 865 ntBASIC5.65□□□□□ -1.5
AtmQ62388 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
AtmQ62388 AC161884.1-201ENSMUST00000225436 2174 ntBASIC5.65□□□□□ -1.5
AtmQ62388 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.65□□□□□ -1.5
AtmQ62388 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
AtmQ62388 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
AtmQ62388 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
AtmQ62388 Gm28874-201ENSMUST00000190917 3134 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
AtmQ62388 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Gm14935-201ENSMUST00000121528 1708 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Gm11498-201ENSMUST00000120660 949 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Gm37758-201ENSMUST00000194275 629 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Ighv1-35-201ENSMUST00000195265 351 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.65□□□□□ -1.51
AtmQ62388 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.65□□□□□ -1.51
AtmQ62388 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
AtmQ62388 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Mir7087-201ENSMUST00000184840 70 ntBASIC5.64□□□□□ -1.51
AtmQ62388 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.64□□□□□ -1.51
AtmQ62388 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
AtmQ62388 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.64□□□□□ -1.51
AtmQ62388 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm15171-201ENSMUST00000122191 334 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5.64□□□□□ -1.51
AtmQ62388 Mir409-201ENSMUST00000198153 79 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Gm18689-201ENSMUST00000203969 902 ntBASIC5.64□□□□□ -1.51
AtmQ62388 Gm19936-201ENSMUST00000216414 838 ntBASIC5.64□□□□□ -1.51
AtmQ62388 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Zfp292-201ENSMUST00000047950 9986 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
AtmQ62388 Gm22807-201ENSMUST00000082737 129 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms