Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm24286-201ENSMUST00000157632 128 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm22210-201ENSMUST00000158101 144 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm25435-201ENSMUST00000158277 267 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm18128-201ENSMUST00000172625 511 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm6472-201ENSMUST00000178147 651 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Sox1P53783 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm28846-201ENSMUST00000189161 368 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm28414-201ENSMUST00000190111 294 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm38226-201ENSMUST00000192207 521 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Igkv12-49-201ENSMUST00000197714 278 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm20223-201ENSMUST00000199932 805 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm44135-201ENSMUST00000205221 368 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 AC156832.3-201ENSMUST00000215591 435 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm7240-201ENSMUST00000220769 664 ntBASIC7.29□□□□□ -1.24
Sox1P53783 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.29□□□□□ -1.24
Sox1P53783 AC154727.1-201ENSMUST00000226537 499 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Sox1P53783 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Sox1P53783 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Sox1P53783 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Mir298-201ENSMUST00000083476 82 ntBASIC7.29□□□□□ -1.24
Sox1P53783 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Sox1P53783 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm37150-201ENSMUST00000193900 2754 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Sox1P53783 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.29□□□□□ -1.24
Sox1P53783 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Sox1P53783 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm43497-201ENSMUST00000201137 2316 ntBASIC7.28□□□□□ -1.24
Sox1P53783 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm5402-201ENSMUST00000119588 1618 ntBASIC7.28□□□□□ -1.24
Sox1P53783 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
Sox1P53783 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Sox1P53783 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
Sox1P53783 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC7.28□□□□□ -1.24
Sox1P53783 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm25780-201ENSMUST00000122528 253 ntBASIC7.28□□□□□ -1.24
Sox1P53783 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm17194-201ENSMUST00000164610 348 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm24417-201ENSMUST00000178123 79 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm24653-201ENSMUST00000178541 79 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm25934-201ENSMUST00000178642 79 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Mir6903-201ENSMUST00000183597 88 ntBASIC7.28□□□□□ -1.24
Sox1P53783 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.28□□□□□ -1.24
Sox1P53783 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Sox1P53783 Gm29144-201ENSMUST00000189235 339 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm28607-201ENSMUST00000190142 339 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm28121-201ENSMUST00000191420 339 ntBASIC7.28□□□□□ -1.24
Sox1P53783 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.28□□□□□ -1.24
Sox1P53783 Gm17953-201ENSMUST00000192061 667 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm38146-201ENSMUST00000194121 1293 ntBASIC7.28□□□□□ -1.24
Sox1P53783 Gm29813-201ENSMUST00000195856 447 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms