Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm44361-201ENSMUST00000197960 94 ntBASIC5.52□□□□□ -1.53
P20040 Gm44374-201ENSMUST00000199821 140 ntBASIC5.52□□□□□ -1.53
P20040 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.52□□□□□ -1.53
P20040 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC5.52□□□□□ -1.53
P20040 Gm2225-201ENSMUST00000209570 377 ntBASIC5.52□□□□□ -1.53
P20040 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.52□□□□□ -1.53
P20040 Gm7413-201ENSMUST00000219498 462 ntBASIC5.52□□□□□ -1.53
P20040 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.52□□□□□ -1.53
P20040 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
P20040 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.52□□□□□ -1.53
P20040 Gm10205-201ENSMUST00000087431 234 ntBASIC5.52□□□□□ -1.53
P20040 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
P20040 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
P20040 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
P20040 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.52□□□□□ -1.53
P20040 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
P20040 Gm42727-201ENSMUST00000202446 2823 ntBASIC5.52□□□□□ -1.53
P20040 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.51□□□□□ -1.53
P20040 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.51□□□□□ -1.53
P20040 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.51□□□□□ -1.53
P20040 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.51□□□□□ -1.53
P20040 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.51□□□□□ -1.53
P20040 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.51□□□□□ -1.53
P20040 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
P20040 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.51□□□□□ -1.53
P20040 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm12937-201ENSMUST00000118333 448 ntBASIC5.51□□□□□ -1.53
P20040 Gm11920-201ENSMUST00000118491 563 ntBASIC5.51□□□□□ -1.53
P20040 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
P20040 Gm12451-201ENSMUST00000121636 633 ntBASIC5.51□□□□□ -1.53
P20040 Gm11609-201ENSMUST00000121926 793 ntBASIC5.51□□□□□ -1.53
P20040 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC5.51□□□□□ -1.53
P20040 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.51□□□□□ -1.53
P20040 Gm23207-201ENSMUST00000158665 102 ntBASIC5.51□□□□□ -1.53
P20040 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC5.51□□□□□ -1.53
P20040 Gm3344-201ENSMUST00000169610 603 ntBASIC5.51□□□□□ -1.53
P20040 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
P20040 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.51□□□□□ -1.53
P20040 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.51□□□□□ -1.53
P20040 Gm44265-201ENSMUST00000203631 465 ntBASIC5.51□□□□□ -1.53
P20040 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm2996-201ENSMUST00000211398 537 ntBASIC5.51□□□□□ -1.53
P20040 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.51□□□□□ -1.53
P20040 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm6436-201ENSMUST00000077163 451 ntBASIC5.51□□□□□ -1.53
P20040 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
P20040 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
P20040 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
P20040 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.51□□□□□ -1.53
P20040 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
P20040 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.5□□□□□ -1.53
P20040 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
P20040 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P20040 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P20040 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.5□□□□□ -1.53
P20040 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.5□□□□□ -1.53
P20040 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
P20040 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
P20040 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
P20040 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
P20040 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
P20040 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
P20040 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.5□□□□□ -1.53
P20040 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
P20040 Gm12439-201ENSMUST00000117162 365 ntBASIC5.5□□□□□ -1.53
P20040 Gm14513-201ENSMUST00000117403 123 ntBASIC5.5□□□□□ -1.53
P20040 Gm14659-201ENSMUST00000117667 843 ntBASIC5.5□□□□□ -1.53
P20040 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.5□□□□□ -1.53
P20040 Gm12115-201ENSMUST00000119969 447 ntBASIC5.5□□□□□ -1.53
P20040 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
P20040 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.5□□□□□ -1.53
P20040 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms