Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm14098-201ENSMUST00000119295 623 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm20701-201ENSMUST00000176082 347 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm9442-201ENSMUST00000194242 319 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm44111-201ENSMUST00000204649 399 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 AC105407.2-205ENSMUST00000224680 2733 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 AC167013.5-201ENSMUST00000227597 2947 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Lig3-211ENSMUST00000173722 5797 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Col6a3E9PWQ3 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm13213-201ENSMUST00000119668 474 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm14472-201ENSMUST00000119815 282 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm37828-201ENSMUST00000192496 432 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm36448-201ENSMUST00000199916 438 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm20786-201ENSMUST00000212649 436 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm17915-201ENSMUST00000222077 548 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Inpp5d-201ENSMUST00000042275 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm24935-201ENSMUST00000103770 110 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm7312-201ENSMUST00000118798 469 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm14564-201ENSMUST00000122159 294 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm3362-201ENSMUST00000148102 466 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm8264-201ENSMUST00000217801 465 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm8158-201ENSMUST00000219220 465 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm8112-201ENSMUST00000219637 465 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm43279-201ENSMUST00000202376 2512 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm44754-201ENSMUST00000208155 400 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a3E9PWQ3 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm18163-201ENSMUST00000197877 1643 ntBASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Lin54-202ENSMUST00000123572 4592 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a3E9PWQ3 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms