Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm14531-201ENSMUST00000120845 285 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm6067-201ENSMUST00000121648 491 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm2619-202ENSMUST00000166777 651 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm29551-201ENSMUST00000190913 698 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm37135-201ENSMUST00000192652 534 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm4332-201ENSMUST00000196114 346 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm3544-201ENSMUST00000196129 305 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm43849-201ENSMUST00000201086 215 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 BC049739-201ENSMUST00000202626 660 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm5318-201ENSMUST00000205249 406 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Gm2614-201ENSMUST00000223227 403 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
H2afb2S4R1M3 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Pramel-201ENSMUST00000118979 1383 ntBASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
H2afb2S4R1M3 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm12439-201ENSMUST00000117162 365 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm11256-201ENSMUST00000118109 829 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm24682-201ENSMUST00000158764 137 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm6541-201ENSMUST00000165542 561 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm19815-201ENSMUST00000175818 335 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm6119-201ENSMUST00000193443 1206 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm18290-201ENSMUST00000202900 844 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 AC173482.3-201ENSMUST00000225492 1212 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
H2afb2S4R1M3 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm37926-201ENSMUST00000191922 2424 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm14054-201ENSMUST00000120744 704 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm14515-201ENSMUST00000121327 216 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
H2afb2S4R1M3 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms